Update description

README.md

@@ -1,7 +1,7 @@
 # Pyra
 
-A personal AI assistant CLI with vault-first security. Combines multi-provider AI chat with
-long-term memory and (coming) automation skills.
+A personal AI assistant CLI with vault-first security. Combines multi-provider AI chat,
+long-term memory, and an extensible plugin system.
 
 ## Quick Start
 
@@ -31,6 +31,11 @@ pyra chat             # start talking
 | `pyra memory read <name>` | Read a memory file |
 | `pyra memory write <name> <content>` | Write a memory file |
 | `pyra memory append <name> <content>` | Append to a memory file |
+| `pyra plugin list` | List installed and available plugins |
+| `pyra plugin install <name>` | Install a bundled plugin |
+| `pyra plugin enable <name>` | Enable an installed plugin |
+| `pyra plugin disable <name>` | Disable a plugin (keeps it installed) |
+| `pyra plugin setup <name>` | Run a plugin's credential setup wizard |
 
 ### In-chat slash commands
 
@@ -38,6 +43,7 @@ pyra chat             # start talking
 |---------|-------------|
 | `/help` | Show available commands |
 | `/memory list` | List memory files |
+| `/config` | Open the configuration TUI |
 | `/clear` | Clear conversation history |
 | `/quit` or `/exit` | Exit Pyra |
 
@@ -48,16 +54,33 @@ pyra chat             # start talking
 - **Prompt injection scanner** — warns on suspicious AI output, logs to `~/.pyra/security.log`
 - **Path sandboxing** — the AI can only reference memory files by name; traversal is blocked
 
+## Plugins
+
+Pyra has an extensible plugin system. Bundled plugins are shipped with Pyra and installed on
+demand; third-party plugins can be dropped into `~/.pyra/plugins/` directly.
+
+Each plugin is a directory containing a `manifest.json` and a `plugin.py`. Plugin credentials
+are stored in the vault under namespaced keys (`plugin:<name>:<key>`) — never in `config.yaml`.
+
+```bash
+pyra plugin list                  # see what's available
+pyra plugin install <name>        # copy a bundled plugin to ~/.pyra/plugins/
+pyra plugin setup <name>          # enter credentials (stored in vault)
+pyra plugin enable <name>         # activate for the next chat session
+```
+
 ## Memory
 
 Pyra reads your memory files at the start of each session and injects them as context.
-Files are plain Markdown stored in `~/.pyra/memory/`:
+Files are plain Markdown stored in `~/.pyra/memory/`, indexed by a SQLite full-text search
+database (`memory.db`) for fast in-chat lookup.
 
 ```
 ~/.pyra/memory/
 ├── user/profile.md     ← who you are
 ├── context/            ← ongoing projects
-└── knowledge/          ← general notes
+├── knowledge/          ← general notes
+└── memory.db           ← FTS5 search index (auto-managed)
 ```
 
 ## `~/.pyra/` Directory
@@ -67,15 +90,25 @@ Files are plain Markdown stored in `~/.pyra/memory/`:
 ├── config.yaml         ← provider + model (no secrets)
 ├── security.log        ← injection event log
 ├── memory/             ← AI-readable long-term memory
-├── skills/             ← automation scripts (Stage 2)
+│   └── memory.db       ← SQLite FTS5 search index
+├── plugins/            ← installed plugins
+│   └── <name>/
+│       ├── manifest.json
+│       └── plugin.py
+├── logs/               ← execution logs
+│   ├── tool_executions.log
+│   └── plugin_errors.log
 └── vault/              ← secure, AI-inaccessible storage
     └── secrets/api_keys.json
 ```
 
 ## Roadmap
 
-- **Stage 1** (now): Core CLI, multi-provider chat, memory, vault security
-- **Stage 2**: Skills — shell/PowerShell/Python automations with user approval gates
-- **Stage 3**: Vault encryption with `age`
-- **Stage 4**: Security audit sub-agent
-- **Stage 5**: Web UI, embedding-based memory search
+- **Stage 1** ✅ Core CLI — multi-provider chat, memory, vault security
+- **Stage 2** ✅ Plugin Framework — extensible tools, slash commands, approval gates
+- **Stage 3** ✅ Memory Database — SQLite + FTS5 full-text search index
+- **Stage 4** Vault Encryption — `age`-based encryption of `~/.pyra/vault/secrets/`
+- **Stage 5** Skills System — YAML-defined multi-plugin workflows with event triggers
+- **Stage 6** Daemon + Messaging Bots — always-on asyncio daemon, Matrix/Telegram/Signal bots
+- **Stage 7** Security Audit Sub-agent — automated scanning for injection, CVEs, permission drift
+- **Stage 8** Web UI — optional local interface, embedding-based memory search

src/pyra/cli.py

@@ -174,7 +174,7 @@ def plugin_install(name: str) -> None:
         install_bundled_plugin(name, bundled_dir, plugins_dir)
         console.print(f"[green]Installed:[/green] {name}")
         console.print(f"  Enable:  [dim]pyra plugin enable {name}[/dim]")
-        console.print(f"  Confirm: [dim]pyra plugin setup {name}[/dim]")
+        console.print(f"  Configure: [dim]pyra plugin setup {name}[/dim]")
     except FileNotFoundError as exc:
         console.print(f"[red]Error:[/red] {exc}")
     except Exception as exc:
@@ -269,40 +269,40 @@ def daemon() -> None:
 @daemon.command("start")
 def daemon_start() -> None:
     """Start the Pyra daemon in the background."""
-    console.print("[yellow]Daemon (Stage 2.4) is not yet implemented.[/yellow]")
+    console.print("[yellow]Daemon (Stage 6) is not yet implemented.[/yellow]")
 
 
 @daemon.command("stop")
 def daemon_stop() -> None:
     """Stop the running Pyra daemon."""
-    console.print("[yellow]Daemon (Stage 2.4) is not yet implemented.[/yellow]")
+    console.print("[yellow]Daemon (Stage 6) is not yet implemented.[/yellow]")
 
 
 @daemon.command("status")
 def daemon_status() -> None:
     """Show daemon status."""
-    console.print("[yellow]Daemon (Stage 2.4) is not yet implemented.[/yellow]")
+    console.print("[yellow]Daemon (Stage 6) is not yet implemented.[/yellow]")
 
 
 @daemon.command("restart")
 def daemon_restart() -> None:
     """Restart the Pyra daemon."""
-    console.print("[yellow]Daemon (Stage 2.4) is not yet implemented.[/yellow]")
+    console.print("[yellow]Daemon (Stage 6) is not yet implemented.[/yellow]")
 
 
 @daemon.command("install")
 def daemon_install() -> None:
     """Install Pyra as a system service (launchd/systemd)."""
-    console.print("[yellow]Daemon service install (Stage 2.4) is not yet implemented.[/yellow]")
+    console.print("[yellow]Daemon service install (Stage 6) is not yet implemented.[/yellow]")
 
 
 @daemon.command("uninstall")
 def daemon_uninstall() -> None:
     """Remove the Pyra system service."""
-    console.print("[yellow]Daemon service uninstall (Stage 2.4) is not yet implemented.[/yellow]")
+    console.print("[yellow]Daemon service uninstall (Stage 6) is not yet implemented.[/yellow]")
 
 
 @daemon.command("run", hidden=True)
 def daemon_run() -> None:
     """Run daemon in foreground (used by service manager)."""
-    console.print("[yellow]Daemon (Stage 2.4) is not yet implemented.[/yellow]")
+    console.print("[yellow]Daemon (Stage 6) is not yet implemented.[/yellow]")